Photosynthetica X:X | DOI: 10.32615/ps.2026.025

Full-length transcriptome and RNA-Seq analyses reveal the molecular mechanism of light protection in Hosta ventricosa

X.J. QU1, 2, D.Y. CHE1, X.H. JIANG1, S.Q. LI1, H.Z. LIU2
1 College of Food and Pharmaceutical Engineering, Liubao Tea Modern Industry College, Wuzhou University, 543002 Guangxi, China
2 College of Life Sciences, Jilin Agricultural University, 130118 Changchun, China

Hosta ventricosa is a popular shade-tolerant ornamental perennial vulnerable to high light, whose molecular mechanisms of high-light stress response remain unclear. To clarify this, we measured leaf morphology, photosynthetic physiology, and performed integrated analyses using PacBio full-length and Illumina transcriptome sequencing on plants under full sunlight (FS), moderate shade (MS), and deep shade (DS) treatments. The results indicated that MS showed optimal growth, whereas FS and DS inhibited growth, each associated with distinct gene expression profiles. High light induced VDE by 5.68-fold to activate the xanthophyll cycle and repress light-harvesting complex II and ribulose-1,5-bisphosphate carboxylase/oxygenase genes, whereas deep shade inhibited the photosynthetic apparatus and triggered stress genes. In contrast, deep shade conditions suppressed the photosynthetic machinery and induced the expression of stress-related genes. This study elucidates the molecular mechanisms underlying light stress responses in H. ventricosa, providing valuable insights for future molecular breeding efforts.

Additional key words: high-light stress response; Hosta ventricosa; hybrid transcriptome; photoinhibition; photoprotection.

Received: April 24, 2026; Revised: June 24, 2026; Accepted: August 20, 2026; Prepublished online: September 17, 2026 

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References

  1. Adamiec M., Gibasiewicz K., Luciński R. et al.: Excitation energy transfer and charge separation are affected in Arabidopsis thaliana mutants lacking light-harvesting chlorophyll a/b binding protein Lhcb3. - J. Photoch. Photobio. B 153: 423-428, 2015.
  2. Bauer R.K., Szalay L., Tombacz E.: Migration of electronic energy from chlorophyll b to chlorophyll a in solutions. - Biophys. J. 12: 731-745, 1972.
  3. Bhattacharjee S., Gordiy I., Sirohiwal A., Pantazis D.A.: Microscopic basis of reaction center modulation in PsbA variants of photosystem II. - PNAS 122: e2417963122, 2025.
  4. Biswal S., Gupta P.S.S., Panda S.K. et al.: Insights into the binding mechanism of ascorbic acid and violaxanthin with violaxanthin de-epoxidase (VDE) and chlorophycean violaxanthin de-epoxidase (CVDE) enzymes. - Photosynth. Res. 156: 337-354, 2023.
  5. Chuang H.-W., Feng J.-H., Feng Y.-L., Wei M.-J.: An Arabidopsis WDR protein coordinates cellular networks involved in light, stress response and hormone signals. - Plant Sci. 241: 23-31, 2015.
  6. Crepin A., Caffarri S.: The specific localizations of phosphorylated Lhcb1 and Lhcb2 isoforms reveal the role of Lhcb2 in the formation of the PSI-LHCII supercomplex in Arabidopsis during state transitions. - BBA-Bioenergetics 1847: 1539-1548, 2015.
  7. Damkjær J.T., Kereïche S., Johnson M.P. et al.: The photosystem II light-harvesting protein Lhcb3 affects the macrostructure of photosystem II and the rate of state transitions in Arabidopsis. - Plant Cell 21: 3245-3256, 2009.
  8. Demmig-Adams B., Garab G., Adams III W., Govindjee: Non-Photochemical Quenching and Energy Dissipation in Plants, Algae and Cyanobacteria. Advances in Photosynthesis and Respiration. Pp. 649. Springer, Dordrecht 2014.
  9. Endo H., Moriyama H., Okumura Y.: Photoinhibition and photoprotective responses of a brown marine macroalga acclimated to different light and nutrient regimes. - Antioxidants 12: 357, 2023.
  10. Essemine J., Ammar S., Jbir N., Bouzid S.: Sensitivity of two wheat species's seeds (Triticum durum, variety Karim and Triticum aestivum, variety Salambô) to heat constraint during germination. - Pak. J. Biol. Sci. 10: 3762-3768, 2007.
  11. Gangappa S.N., Botto J.F.: The multifaceted roles of HY5 in plant growth and development. - Mol. Plant 9: 1353-1365, 2016.
  12. Gao T., Xu Z., Song X. et al.: Hybrid sequencing of full-length cDNA transcripts of the medicinal plant Scutellaria baicalensis. - Int. J. Mol. Sci. 20: 4426, 2019.
  13. Guan C., Ji J., Zhang X. et al.: Positive feedback regulation of a Lycium chinense-derived VDE gene by drought-induced endogenous ABA, and over-expression of this VDE gene improve drought-induced photo-damage in Arabidopsis. - J. Plant Physiol. 175: 26-36, 2015.
  14. He K., Wang L., Ratkowsky D.A., Shi P.: Comparison of four light-response models using relative curvature measures of nonlinearity. - Sci. Rep.-UK 14: 24058, 2024.
  15. Hua X., Song W., Wang K. et al.: Effective prediction of biosynthetic pathway genes involved in bioactive polyphyllins in Paris polyphylla. - Commun. Biol. 5: 50, 2022.
  16. Iguchi S., Tokunaga T., Kamon E. et al.: Lanthanum supplementation alleviates tomato root growth suppression under low light stress. - Plants-Basel 12: 2663, 2023.
  17. Jia X., Tang L., Mei X. et al.: Single-molecule long-read sequencing of the full-length transcriptome of Rhododendron lapponicum L. - Sci. Rep.-UK 10: 6755, 2020.
  18. Jiang H., Fang L., Li J. et al.: Photosystem-driven resilience of green microalga Tetraselmis chuii toward acute nonylphenol stress. - Environ. Sci. Technol. 60: 12034-12045, 2026.
  19. Knack G., Liu Z., Kloppstech K.: Low molecular mass heat-shock proteins of a light-resistant photoautotrophic cell culture. - Eur. J. Cell Biol. 59: 166-175, 1992.
  20. Kromdijk J., Glowacka K., Leonelli L. et al.: Improving photosynthesis and crop productivity by accelerating recovery from photoprotection. - Science 354: 857-861, 2016.
  21. Lempiäinen T., Rintamäki E., Aro E.-M., Tikkanen M.: Plants acclimate to Photosystem I photoinhibition by readjusting the photosynthetic machinery. - Plant Cell Environ. 45: 2954-2971, 2022.
  22. Liu S., Hu L., Jiang D., Xi W.: Effect of post-harvest LED and UV light irradiation on the accumulation of flavonoids and limonoids in the segments of Newhall navel oranges (Citrus sinensis Osbeck). - Molecules 24: 1755, 2019.
  23. Luciński R., Jackowski G.: AtFtsH heterocomplex-mediated degradation of apoproteins of the major light harvesting complex of photosystem II (LHCII) in response to stresses. - J. Plant Physiol. 170: 1082-1089, 2013.
  24. McKew B.A., Davey P., Finch S.J. et al.: The trade-off between the light-harvesting and photoprotective functions of fucoxanthin-chlorophyll proteins dominates light acclimation in Emiliania huxleyi (clone CCMP 1516). - New Phytol. 200: 74-85, 2013.
  25. Mussgnug J.H., Thomas-Hall S., Rupprecht J. et al.: Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion. - Plant Biotechnol. J. 5: 802-814, 2007.
  26. Nascimento L.B.D.S., Leal-Costa M.V., Menezes E.A. et al.: Ultraviolet-B radiation effects on phenolic profile and flavonoid content of Kalanchoe pinnata. - J. Photoch. Photobio. B 148: 73-81, 2015.
  27. Pawlak K., Paul S., Liu C. et al.: On the PsbS-induced quenching in the plant major light-harvesting complex LHCII studied in proteoliposomes. - Photosynth. Res. 144: 195-208, 2020.
  28. Qu X., Che D., Qin F. et al.: Overexpression of HvVDE gene improved light protection in transgenic tobacco (Nicotiana tabacum). - Funct. Plant Biol. 51: FP24180, 2024.
  29. Sako K., Nagashima R., Tamoi M., Seki M.: Exogenous ethanol treatment alleviates oxidative damage of Arabidopsis thaliana under conditions of high-light stress. - Plant Biotechnol. 38: 339-344, 2021.
  30. Sheng X., Liu Z., Kim E., Minagawa J.: Plant and algal PSII-LHCII supercomplexes: structure, evolution and energy transfer. - Plant Cell Physiol. 62: 1108-1120, 2021.
  31. Shi Y., Ke X., Yang X. et al.: Plants response to light stress. - J. Genet. Genomics 49: 735-747, 2022.
  32. Sims D.A., Pearcy R.W.: Photosynthetic characteristics of a tropical forest understory herb, Alocasia macrorrhiza, and a related crop species, Colocasia esculenta grown in contrasting light environments. - Oecologia 79: 53-59, 1989.
  33. Song C., Fan Q., Tang Y. et al.: Overexpression of DfRaf from fragrant woodfern (Dryopteris fragrans) enhances high-temperature tolerance in tobacco (Nicotiana tabacum). - Genes 13: 1212, 2022.
  34. Sun J.W.C., Sharifi M.R., Rundel P.W.: Plasticity in compensatory growth to artificial defoliation and light availability in four neotropical understory and forest edge herb species. - Biology 11: 1532, 2022.
  35. Takeuchi K., Harimoto S., Maekawa S. et al.: PSII photoinhibition as a protective strategy: maintaining an oxidative state of PSI by suppressing PSII activity under environmental stress. - Physiol. Plantarum 177: e70392, 2025.
  36. Thirugnanasambandam P.P., Singode A., Thalambedu L.P. et al.: Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum. - Front. Plant Sci. 14: 1199748, 2023.
  37. Velitchkova M., Popova A.V., Faik A. et al.: Low temperature and high light dependent dynamic photoprotective strategies in Arabidopsis thaliana. - Physiol. Plantarum 170: 93-108, 2020.
  38. Wang C., Zhang H., Wang S., Mao S.: Leaf spot of Hosta ventricosa caused by Fusarium oxysporum in China. - PeerJ 9: e12581, 2021a.
  39. Wang F., Chen Z., Pei H. et al.: Transcriptome profiling analysis of tea plant (Camellia sinensis) using Oxford Nanopore long-read RNA-Seq technology. - Gene 769: 145247, 2021b.
  40. Yan Q., Yang S., Zeng Y. et al.: Light intensity modulates phosphorus adaptation strategies in contrasting rice cultivars through photosynthetic carbon allocation. - Plant Physiol. Biochem. 229: 110432, 2025.
  41. Yang J., Kim S.-C.: Hosta clausa (Asparagaceae) in East Asia: Intraspecific chloroplast genome variation and its phylogenomic implications. - PLoS ONE 20: e0317884, 2025.
  42. Yang L., Wen K.-S., Ruan X. et al.: Response of plant secondary metabolites to environmental factors. - Molecules 23: 762, 2018.
  43. Yang S., Meng D.-Y., Hou L.-L. et al.: Peanut violaxanthin de-epoxidase alleviates the sensitivity of PSII photoinhibition to heat and high irradiance stress in transgenic tobacco. - Plant Cell Rep. 34: 1417-1428, 2015.
  44. Yin C.-C., Huang Y.-H., Zhang X. et al.: Ethylene-mediated regulation of coleoptile elongation in rice seedlings. - Plant Cell Environ. 46: 1060-1074, 2023.
  45. Zhang A., Zhang J., Zhang J. et al.: Nitric oxide mediates brassinosteroid-induced ABA biosynthesis involved in oxidative stress tolerance in maize leaves. - Plant Cell Physiol. 52: 181-192, 2011.
  46. Zhang D., Li W., Chen Z.-J. et al.: SMRT- and Illumina-based RNA-seq analyses unveil the ginsinoside biosynthesis and transcriptomic complexity in Panax notoginseng. - Sci. Rep.-UK 10: 15310, 2020a.
  47. Zhang J., Ge J., Dayananda B., Li J.: Effect of light intensities on the photosynthesis, growth and physiological performances of two maple species. - Front. Plant Sci. 13: 999026, 2022.
  48. Zhang J.-Y., Cun Z., Chen J.-W.: Photosynthetic performance and photosynthesis-related gene expression coordinated in a shade-tolerant species Panax notoginseng under nitrogen regimes. - BMC Plant Biol. 20: 273, 2020b.
  49. Zhang Y., Xu R., Wang Z. et al.: Photosynthetic characteristics of Paris polyphylla var. chinensis in response to different light intensities and soil water contents. - Front. Plant Sci. 15: 1521714, 2025.
  50. Zhu Y., Liu W., Sheng Y. et al.: ABA affects brassinosteroid-induced antioxidant defense via ZmMAP65-1a in maize plants. - Plant Cell Physiol. 56: 1442-1455, 2015.